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publicationDate 2015-04-02-04:00^^<http://www.w3.org/2001/XMLSchema#date>
publicationNumber WO-2015042708-A1
titleOfInvention Methods for detecting nucleic acid fragments
abstract Provided are methods for detecting and analyzing polynucleotides in a biological sample or sample derived therefrom, for example, using a synthetic template polynucleotide. In some aspects, a target polynucleotide in the sample hybridizes to the template polynucleotide and is extended by a polymerase, generating an extended target polynucleotide. In some examples, the extended target polynucleotide is amplified, for example, by polymerase chain reaction, and sequences of the target polynucleotide determined, for example, by priming in the region of the extended target polynucleotide generated by extension and sequencing towards the region having identity to the target polynucleotide. In some aspects, the target polynucleotide is thereby detected in the sample and its sequence identified. In some aspects, the provided methods can be used to capture polynucleotide fragments in a biological sample, for example, plasma, and determine respective biomarkers they carry, for example, for cancer diagnosis and prognosis.
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