http://rdf.ncbi.nlm.nih.gov/pubchem/patent/US-2004191799-A1
Outgoing Links
| Predicate | Object |
|---|---|
| classificationCPCInventive | http://rdf.ncbi.nlm.nih.gov/pubchem/patentcpc/C12N15-64 |
| classificationIPCInventive | http://rdf.ncbi.nlm.nih.gov/pubchem/patentipc/C12N15-64 |
| filingDate | 2003-07-02-04:00^^<http://www.w3.org/2001/XMLSchema#date> |
| inventor | http://rdf.ncbi.nlm.nih.gov/pubchem/patentinventor/MD5_5f638635f419e7d1d0ce64cbcb5d5ef4 |
| publicationDate | 2004-09-30-04:00^^<http://www.w3.org/2001/XMLSchema#date> |
| publicationNumber | US-2004191799-A1 |
| titleOfInvention | Method for plasmid preparation by conversion of open circular plasmid |
| abstract | In accordance with the invention, there is provided a method for converting unligatable open circular plasmid in a plasmid solution to supercoiled plasmid, wherein the unligatable open circular plasmid is derived from plasmid in a cleared lysate of host cells containing the plasmid, comprising the steps: (a) incubating the unligatable open circular plasmid with one or more enzymes in the presence of their appropriate nucleotide cofactors, whereby the unligatable open circular plasmid is converted to 3′-hydroxyl, 5′-phosphate nicked plasmid; (b) incubating the 3′-hydroxyl, 5′-phosphate nicked plasmid with DNA ligase in the presence of DNA ligase nucleotide cofactor, whereby 3′-hydroxyl, 5′-phosphate nicked plasmid is converted to relaxed covalently closed circular plasmid; and (c) incubating the relaxed covalently closed circular plasmid with DNA gyrase in the presence of DNA gyrase nucleotide cofactor, whereby relaxed covalently closed circular plasmid is converted to negatively supercoiled plasmid. Preferably, steps (a), (b), and (c) are performed in a single step using an enzyme mixture comprising DNA polymerase, DNA ligase, and DNA gyrase. Preferably, the mixture further comprises a 3′ deblocking enzyme, such as exonuclease III or 3′-phosphatase. Preferably, the mixture further comprises one or more regenerating enzymes and a high energy phosphate donor, whereby the nucleotide by-products of the nucleotide cofactors generated by DNA ligase and DNA gyrase are converted to back to nucleotide cofactor. Preferably, the enzyme mixture further comprises one or more exonucleases, such as ATP dependent exonuclease, whereby linear chromosomal DNA is selectively degraded. |
| isCitedBy | http://rdf.ncbi.nlm.nih.gov/pubchem/patent/WO-2012045722-A1 http://rdf.ncbi.nlm.nih.gov/pubchem/patent/US-2005084938-A1 http://rdf.ncbi.nlm.nih.gov/pubchem/patent/US-2005255563-A1 http://rdf.ncbi.nlm.nih.gov/pubchem/patent/EP-2439276-A1 http://rdf.ncbi.nlm.nih.gov/pubchem/patent/US-2005069991-A1 |
| priorityDate | 2003-03-25-04:00^^<http://www.w3.org/2001/XMLSchema#date> |
| type | http://data.epo.org/linked-data/def/patent/Publication |
Incoming Links
Total number of triples: 390.